registration Registers two images together using a rigid transform and MI 1.0 Daniel Blezek Registration Parameters Parameters used for registration HistogramBins -b --histogrambins Number of histogram bins to use for Mattes Mutual Information Histogram Bins 30 1 500 5 SpatialSamples -s --spatialsamples Number of spatial samples to use in estimating Mattes Mutual Information Spatial Samples 10000 1000 50000 1000 InitializeTransform -u --noinitializetransform Calculate initial transform Initialize TransformSpatial Samples false Iterations -i --iterations Comma separated list of iterations. Must have the same number of elements as learning rate Iterations 100,100,100,200 LearningRate -l --learningrate Comma separated list of learning rates must have the same number of elements as iterations Learning Rates 0.005,0.001,0.0005,0.0002 TranslationScale --translationscale -t Relative scale of translations to rotations, i.e. a value of 100 means 10mm = 1 degree Translation scaling 100.0 10.0 500.0 50.0 IO Input/output parameters FixedImage Fixed Image input 0 Fixed image to register to MovingImage Moving Image input 1 Moving image OutputImage Output Volume output 2 Resampled Moving Image